Pairwise fitting pdb-2zz9 on emdb-5166 by gmfit










Pairwise fitting of target pdb-2zz9 on reference emdb-5166 by gmfit(PID:4077345).





RANK[1] Corr.Coeff:0.463

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-2zz9)

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b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-2zz9)]







REFERENCE(emdb-5166)

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3D reconstruction of a microtubule decorated with monomeric human kinesin (K349 construct) having AMPPNP bound in the nucleotide pocket. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.463
0.459
0.450
0.446
0.444
0.425
0.417
0.405
0.401
0.390







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5166.map.gz", and read it.

  2.  Download the Target molecule "2zz9"(PDB-format) or
  "2zz9"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.147087,0.356590,0.922610 65.888260 center 0,0,0 model #1
move 92.609678,-45.403222,-87.783216 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!