Pairwise fitting pdb-2zz9 on emdb-2868 by gmfit










Pairwise fitting of target pdb-2zz9 on reference emdb-2868 by gmfit(PID:3818891).





RANK[1] Corr.Coeff:0.517

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-2zz9)

display:



color:



b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-2zz9)]







REFERENCE(emdb-2868)

display:



color:


Reconstruction of nucleoplasmin isolated from oocytes [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.517
0.470
0.445
0.434
0.432
0.416
0.404
0.403
0.384
0.379







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2868.map.gz", and read it.

  2.  Download the Target molecule "2zz9"(PDB-format) or
  "2zz9"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.685226,0.516141,-0.513871 155.141331 center 0,0,0 model #1
move 35.173486,132.766806,114.219077 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!