Pairwise fitting pdb-2zz9 on emdb-2529 by gmfit



Pairwise fitting of target pdb-2zz9 on reference emdb-2529 by gmfit(PID:1220123).

RANK[1] Corr.Coeff:0.622 [JSmol] [Molmil]
TARGET(pdb-2zz9)
display:
color:
b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-2zz9)]
REFERENCE(emdb-2529)
display:
color:
Single particle electron microscopy of the human mitochondrial transcription initiation complex [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.622 0.583 0.573 0.553 0.544 0.523 0.517 0.513 0.506 0.496

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_2529.map.gz", and read it.
  2. Download the Target molecule "2zz9"(PDB-format) or "2zz9"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.735000,-0.242781,-0.633114 77.023876 center 0,0,0 model #1
    move -23.619103,-74.349772,-9.088008 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!