Pairwise fitting pdb-2zz9 on emdb-1409 by gmfit



Pairwise fitting of target pdb-2zz9 on reference emdb-1409 by gmfit(PID:1150004).

RANK[1] Corr.Coeff:0.525 [JSmol] [Molmil]
TARGET(pdb-2zz9)
display:
color:
b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-2zz9)]
REFERENCE(emdb-1409)
display:
color:
The EM structure of human DNA polymerase gamma reveals a localized contact between the catalytic and accessory subunits. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.525 0.522 0.521 0.506 0.497 0.492 0.475 0.459 0.458 0.458

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1409.map.gz", and read it.
  2. Download the Target molecule "2zz9"(PDB-format) or "2zz9"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.619867,-0.454401,-0.639754 128.385322 center 0,0,0 model #1
    move -92.658558,-114.349206,-28.905337 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!