Pairwise fitting pdb-1x18 on pdb-1jqm by gmfit










Pairwise fitting of target pdb-1x18 on reference pdb-1jqm by gmfit(PID:4160380).





RANK[1] Corr.Coeff:0.537

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1x18)

display:



color:



b'CONTACT SITES OF ERA GTPASE ON THE THERMUS THERMOPHILUS 30S SUBUNIT   ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1x18)]







REFERENCE(pdb-1jqm)

display:



color:


b'FITTING OF L11 PROTEIN AND ELONGATION FACTOR G (EF-G) IN THE CRYO-EM  ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.537
0.487
0.454
0.451
0.444
0.384
0.355
0.347
0.321
0.300







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "1jqm"(PDB-format) or 
 "1jqm"(mmCIF-format), and read it.

  2.  Download the Target molecule "1x18"(PDB-format) or
  "1x18"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.007276,0.956641,-0.291180 129.784811 center 0,0,0 model #1
move -128.110441,33.536462,-72.123897 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!