Pairwise fitting pdb-1x18 on emdb-1788 by gmfit



Pairwise fitting of target pdb-1x18 on reference emdb-1788 by gmfit(PID:1107256).

RANK[1] Corr.Coeff:0.616 [JSmol] [Molmil]
TARGET(pdb-1x18)
display:
color:
b'CONTACT SITES OF ERA GTPASE ON THE THERMUS THERMOPHILUS 30S SUBUNIT ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-1x18)]
REFERENCE(emdb-1788)
display:
color:
Doublecortin-stabilised microtubules at secondary structure resolution [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.616 0.553 0.527 0.521 0.512 0.484 0.448 0.432 0.419 0.403

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1788.map.gz", and read it.
  2. Download the Target molecule "1x18"(PDB-format) or "1x18"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.818337,-0.233839,0.525019 169.040255 center 0,0,0 model #1
    move 156.410595,126.490930,45.044869 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!