Pairwise fitting pdb-1x18 on emdb-1356 by gmfit










Pairwise fitting of target pdb-1x18 on reference emdb-1356 by gmfit(PID:3830646).





RANK[1] Corr.Coeff:0.455

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1x18)

display:



color:



b'CONTACT SITES OF ERA GTPASE ON THE THERMUS THERMOPHILUS 30S SUBUNIT   ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1x18)]







REFERENCE(emdb-1356)

display:



color:


Structural basis for the PufX-mediated dimerization of bacterial photosynthetic core complexes. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.455
0.415
0.408
0.402
0.396
0.383
0.374
0.362
0.357
0.353







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1356.map.gz", and read it.

  2.  Download the Target molecule "1x18"(PDB-format) or
  "1x18"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.549736,-0.526513,0.648517 37.016897 center 0,0,0 model #1
move 79.630923,27.531917,-33.044008 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!