Pairwise fitting pdb-1p58 on pdb-5u4w by gmfit










Pairwise fitting of target pdb-1p58 on reference pdb-5u4w by gmfit(PID:3997635).





RANK[1] Corr.Coeff:0.396

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1p58)

display:



color:



b'COMPLEX ORGANIZATION OF DENGUE VIRUS MEMBRANE PROTEINS AS REVEALED BY ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1p58)]







REFERENCE(pdb-5u4w)

display:



color:


b'CRYO-EM STRUCTURE OF IMMATURE ZIKA VIRUS                              ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.396
0.340
0.336
0.258
0.245
0.243
0.231
0.227
0.196
0.193







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5u4w"(PDB-format) or 
 "5u4w"(mmCIF-format), and read it.

  2.  Download the Target molecule "1p58"(PDB-format) or
  "1p58"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.691942,0.537923,-0.481513 97.101214 center 0,0,0 model #1
move -20.030320,346.006663,178.033914 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!