Pairwise fitting pdb-1p58 on pdb-4ux2 by gmfit










Pairwise fitting of target pdb-1p58 on reference pdb-4ux2 by gmfit(PID:48957).





RANK[1] Corr.Coeff:0.523

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1p58)

display:



color:



b'COMPLEX ORGANIZATION OF DENGUE VIRUS MEMBRANE PROTEINS AS REVEALED BY ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1p58)]







REFERENCE(pdb-4ux2)

display:



color:


b'CRYO-EM STRUCTURE OF ANTAGONIST-BOUND E2P GASTRIC H,K-ATPASE          ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.523
0.467
0.450
0.401
0.397
0.379
0.368
0.332
0.276
0.242







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4ux2"(PDB-format) or 
 "4ux2"(mmCIF-format), and read it.

  2.  Download the Target molecule "1p58"(PDB-format) or
  "1p58"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.769285,0.039036,0.637712 158.902143 center 0,0,0 model #1
move 208.465838,-67.909880,7.439180 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!