Pairwise fitting pdb-1p58 on pdb-4ux1 by gmfit










Pairwise fitting of target pdb-1p58 on reference pdb-4ux1 by gmfit(PID:1329447).





RANK[1] Corr.Coeff:0.520

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1p58)

display:



color:



b'COMPLEX ORGANIZATION OF DENGUE VIRUS MEMBRANE PROTEINS AS REVEALED BY ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1p58)]







REFERENCE(pdb-4ux1)

display:



color:


b'CRYO-EM STRUCTURE OF ANTAGONIST-BOUND E2P GASTRIC H,K-ATPASE          ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.520
0.496
0.474
0.472
0.470
0.433
0.430
0.330
0.276
0.242







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4ux1"(PDB-format) or 
 "4ux1"(mmCIF-format), and read it.

  2.  Download the Target molecule "1p58"(PDB-format) or
  "1p58"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.785130,0.062657,0.616154 156.433120 center 0,0,0 model #1
move 198.601579,-78.993612,15.293297 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!