Pairwise fitting pdb-1p58 on pdb-4abo by gmfit










Pairwise fitting of target pdb-1p58 on reference pdb-4abo by gmfit(PID:3651863).





RANK[1] Corr.Coeff:0.532

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1p58)

display:



color:



b'COMPLEX ORGANIZATION OF DENGUE VIRUS MEMBRANE PROTEINS AS REVEALED BY ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1p58)]







REFERENCE(pdb-4abo)

display:



color:


b'MAL3 CH DOMAIN HOMOLOGY MODEL AND MAMMALIAN TUBULIN (2XRP) DOCKED INTO' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.532
0.492
0.481
0.475
0.459
0.443
0.418
0.417
0.383
0.365







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4abo"(PDB-format) or 
 "4abo"(mmCIF-format), and read it.

  2.  Download the Target molecule "1p58"(PDB-format) or
  "1p58"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.398618,-0.655860,-0.641055 144.104090 center 0,0,0 model #1
move 312.650710,-21.517020,302.425146 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!