Pairwise fitting pdb-1p58 on pdb-2y83 by gmfit










Pairwise fitting of target pdb-1p58 on reference pdb-2y83 by gmfit(PID:4003216).





RANK[1] Corr.Coeff:0.578

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1p58)

display:



color:



b'COMPLEX ORGANIZATION OF DENGUE VIRUS MEMBRANE PROTEINS AS REVEALED BY ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1p58)]







REFERENCE(pdb-2y83)

display:



color:


b'ACTIN FILAMENT POINTED END                                            ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.578
0.571
0.557
0.528
0.525
0.503
0.458
0.420
0.336
0.281







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2y83"(PDB-format) or 
 "2y83"(mmCIF-format), and read it.

  2.  Download the Target molecule "1p58"(PDB-format) or
  "1p58"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.291336,-0.889778,-0.351309 101.263622 center 0,0,0 model #1
move 238.297671,-50.295051,62.741953 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!