Pairwise fitting pdb-1p58 on pdb-2xzb by gmfit










Pairwise fitting of target pdb-1p58 on reference pdb-2xzb by gmfit(PID:3518199).





RANK[1] Corr.Coeff:0.524

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1p58)

display:



color:



b'COMPLEX ORGANIZATION OF DENGUE VIRUS MEMBRANE PROTEINS AS REVEALED BY ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1p58)]







REFERENCE(pdb-2xzb)

display:



color:


b'PIG GASTRIC H,K-ATPASE WITH BOUND BEF AND SCH28080                    ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.524
0.497
0.468
0.443
0.387
0.376
0.369
0.328
0.260
0.235







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2xzb"(PDB-format) or 
 "2xzb"(mmCIF-format), and read it.

  2.  Download the Target molecule "1p58"(PDB-format) or
  "1p58"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.786240,0.075740,0.613262 155.424840 center 0,0,0 model #1
move 196.524932,-83.106842,14.953941 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!