Pairwise fitting pdb-1p58 on pdb-2v6l by gmfit










Pairwise fitting of target pdb-1p58 on reference pdb-2v6l by gmfit(PID:2285350).





RANK[1] Corr.Coeff:0.574

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1p58)

display:



color:



b'COMPLEX ORGANIZATION OF DENGUE VIRUS MEMBRANE PROTEINS AS REVEALED BY ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1p58)]







REFERENCE(pdb-2v6l)

display:



color:


b'MOLECULAR MODEL OF A TYPE III SECRETION SYSTEM NEEDLE                 ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.574
0.573
0.569
0.560
0.554
0.541
0.534
0.532
0.372
0.372







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2v6l"(PDB-format) or 
 "2v6l"(mmCIF-format), and read it.

  2.  Download the Target molecule "1p58"(PDB-format) or
  "1p58"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.542922,-0.741878,0.393514 103.827291 center 0,0,0 model #1
move 65.535999,194.819840,95.198033 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!