Pairwise fitting pdb-1p58 on pdb-2b6b by gmfit










Pairwise fitting of target pdb-1p58 on reference pdb-2b6b by gmfit(PID:3542182).





RANK[1] Corr.Coeff:0.762

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1p58)

display:



color:



b'COMPLEX ORGANIZATION OF DENGUE VIRUS MEMBRANE PROTEINS AS REVEALED BY ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1p58)]







REFERENCE(pdb-2b6b)

display:



color:


b'CRYO EM STRUCTURE OF DENGUE COMPLEXED WITH CRD OF DC-SIGN             ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.762
0.403
0.398
0.397
0.381
0.336
0.331
0.303
0.284
0.268







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2b6b"(PDB-format) or 
 "2b6b"(mmCIF-format), and read it.

  2.  Download the Target molecule "1p58"(PDB-format) or
  "1p58"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.930502,0.155942,0.331432 2.280494 center 0,0,0 model #1
move -2.192458,8.278352,2.933778 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!