Pairwise fitting pdb-1p58 on pdb-1n6g by gmfit



Pairwise fitting of target pdb-1p58 on reference pdb-1n6g by gmfit(PID:2080937).

RANK[1] Corr.Coeff:0.291 [JSmol] [Molmil]
TARGET(pdb-1p58)
display:
color:
b'COMPLEX ORGANIZATION OF DENGUE VIRUS MEMBRANE PROTEINS AS REVEALED BY ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-1p58)]
REFERENCE(pdb-1n6g)
display:
color:
b'THE STRUCTURE OF IMMATURE DENGUE-2 PRM PARTICLES ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.291 0.264 0.257 0.245 0.232 0.221 0.197 0.192 0.178 0.178

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "1n6g"(PDB-format) or "1n6g"(mmCIF-format), and read it.
  2. Download the Target molecule "1p58"(PDB-format) or "1p58"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.137752,-0.599736,0.788252 159.885125 center 0,0,0 model #1
    move 50.823792,243.591289,121.525025 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!