Pairwise fitting pdb-1p58 on emdb-5045 by gmfit










Pairwise fitting of target pdb-1p58 on reference emdb-5045 by gmfit(PID:4061098).





RANK[1] Corr.Coeff:0.562

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1p58)

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b'COMPLEX ORGANIZATION OF DENGUE VIRUS MEMBRANE PROTEINS AS REVEALED BY ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1p58)]







REFERENCE(emdb-5045)

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Phosphoenolpyruvate synthase structure : Structural survey of large protein complexes in Desulfovibrio vulgaris Hildenborough (DvH) [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.562
0.537
0.452
0.404
0.401
0.388
0.374
0.372
0.369
0.363







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5045.map.gz", and read it.

  2.  Download the Target molecule "1p58"(PDB-format) or
  "1p58"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.016780,0.088864,0.995902 175.154097 center 0,0,0 model #1
move 181.085924,115.151423,-31.871248 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!