Pairwise fitting pdb-1k4r on pdb-4btq by gmfit










Pairwise fitting of target pdb-1k4r on reference pdb-4btq by gmfit(PID:4122699).





RANK[1] Corr.Coeff:0.633

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1k4r)

display:



color:



b'STRUCTURE OF DENGUE VIRUS                                             ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1k4r)]







REFERENCE(pdb-4btq)

display:



color:


b'COORDINATES OF THE BACTERIOPHAGE PHI6 CAPSID SUBUNITS FITTED INTO THE ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.633
0.574
0.523
0.514
0.487
0.321
0.298
0.294
0.276
0.268







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4btq"(PDB-format) or 
 "4btq"(mmCIF-format), and read it.

  2.  Download the Target molecule "1k4r"(PDB-format) or
  "1k4r"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.196583,-0.182641,-0.963326 104.231806 center 0,0,0 model #1
move -25.648637,-24.311049,2.896081 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!