Pairwise fitting pdb-1k4r on pdb-3zko by gmfit



Pairwise fitting of target pdb-1k4r on reference pdb-3zko by gmfit(PID:1478075).

RANK[1] Corr.Coeff:0.844 [JSmol] [Molmil]
TARGET(pdb-1k4r)
display:
color:
b'STRUCTURE OF DENGUE VIRUS ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-1k4r)]
REFERENCE(pdb-3zko)
display:
color:
b"THE STRUCTURE OF ''BREATHING'' DENGUE VIRUS. " [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.844 0.775 0.592 0.520 0.504 0.320 0.307 0.250 0.235 0.235

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "3zko"(PDB-format) or "3zko"(mmCIF-format), and read it.
  2. Download the Target molecule "1k4r"(PDB-format) or "1k4r"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.348048,0.326421,0.878813 14.661624 center 0,0,0 model #1
    move -18.697002,-23.186990,12.360349 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!