Pairwise fitting pdb-1k4r on pdb-2of6 by gmfit










Pairwise fitting of target pdb-1k4r on reference pdb-2of6 by gmfit(PID:4071045).





RANK[1] Corr.Coeff:0.299

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1k4r)

display:



color:



b'STRUCTURE OF DENGUE VIRUS                                             ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1k4r)]







REFERENCE(pdb-2of6)

display:



color:


b'STRUCTURE OF IMMATURE WEST NILE VIRUS                                 ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.299
0.258
0.249
0.237
0.173
0.162
0.161
0.151
0.147
0.143







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2of6"(PDB-format) or 
 "2of6"(mmCIF-format), and read it.

  2.  Download the Target molecule "1k4r"(PDB-format) or
  "1k4r"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.465449,0.773996,-0.429287 132.629432 center 0,0,0 model #1
move -152.531747,36.203960,269.878706 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!