Pairwise fitting pdb-1k4r on emdb-9573 by gmfit










Pairwise fitting of target pdb-1k4r on reference emdb-9573 by gmfit(PID:4037024).





RANK[1] Corr.Coeff:0.003

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1k4r)

display:



color:



b'STRUCTURE OF DENGUE VIRUS                                             ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1k4r)]







REFERENCE(emdb-9573)

display:



color:


Cryo-EM structure of zika virus complexed with Fab C10 at pH 6.5 [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.003
0.003
0.003
0.003
0.003
0.003
0.003
0.003
0.003
0.003







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_9573.map.gz", and read it.

  2.  Download the Target molecule "1k4r"(PDB-format) or
  "1k4r"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.396033,-0.515290,-0.760022 79.042460 center 0,0,0 model #1
move 176.791047,48.975962,-136.281346 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!