Pairwise fitting pdb-1k4r on emdb-5740 by gmfit










Pairwise fitting of target pdb-1k4r on reference emdb-5740 by gmfit(PID:3525853).





RANK[1] Corr.Coeff:0.502

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1k4r)

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b'STRUCTURE OF DENGUE VIRUS                                             ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1k4r)]







REFERENCE(emdb-5740)

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Structure of an RNA silencing complex of the CRISPR-Cas immune system [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.502
0.415
0.388
0.370
0.344
0.343
0.330
0.290
0.274
0.241







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5740.map.gz", and read it.

  2.  Download the Target molecule "1k4r"(PDB-format) or
  "1k4r"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.135207,0.366799,0.920423 160.569464 center 0,0,0 model #1
move 48.715377,-53.265642,-35.236180 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!