Pairwise fitting pdb-1k4r on emdb-1872 by gmfit










Pairwise fitting of target pdb-1k4r on reference emdb-1872 by gmfit(PID:3909927).





RANK[1] Corr.Coeff:0.571

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1k4r)

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color:



b'STRUCTURE OF DENGUE VIRUS                                             ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1k4r)]







REFERENCE(emdb-1872)

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color:


Actin filament pointed end [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.571
0.522
0.461
0.440
0.419
0.386
0.357
0.348
0.321
0.298







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1872.map.gz", and read it.

  2.  Download the Target molecule "1k4r"(PDB-format) or
  "1k4r"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.214833,0.857836,-0.466866 104.343492 center 0,0,0 model #1
move -73.489694,252.729788,87.812139 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!