Pairwise fitting pdb-1k4r on emdb-1841 by gmfit










Pairwise fitting of target pdb-1k4r on reference emdb-1841 by gmfit(PID:4021165).





RANK[1] Corr.Coeff:0.381

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1k4r)

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b'STRUCTURE OF DENGUE VIRUS                                             ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1k4r)]







REFERENCE(emdb-1841)

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Structural basis for the subunit assembly of the anaphase promoting complex [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.381
0.357
0.335
0.333
0.312
0.301
0.269
0.263
0.204
0.199







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1841.map.gz", and read it.

  2.  Download the Target molecule "1k4r"(PDB-format) or
  "1k4r"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.343010,0.836698,-0.426942 43.492248 center 0,0,0 model #1
move -132.182861,107.544867,-170.330195 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!