Pairwise fitting emdb-5372 on pdb-4ctf by gmfit



Pairwise fitting of target emdb-5372 on reference pdb-4ctf by gmfit(PID:1158707).

RANK[1] Corr.Coeff:0.754 [JSmol] [Molmil]
TARGET(emdb-5372)
display:
color:
Structural transitions in RCNMV revealing potential mechanism of RNA release (EGTA map) [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-5372)]
REFERENCE(pdb-4ctf)
display:
color:
[Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.754 0.753 0.752 0.752 0.751 0.749 0.749 0.749 0.749 0.747

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "4ctf"(PDB-format) or "4ctf"(mmCIF-format), and read it.
  2. Download the Target map "emd_5372.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.668447,-0.260120,-0.696790 101.352348 center 0,0,0 model #1
    move 207.911859,205.195475,204.089562 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!