Pairwise fitting emdb-5372 on pdb-3j69 by gmfit










Pairwise fitting of target emdb-5372 on reference pdb-3j69 by gmfit(PID:2228524).





RANK[1] Corr.Coeff:0.115

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5372)

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color:



Structural transitions in RCNMV revealing potential mechanism of RNA release (EGTA map) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5372)]







REFERENCE(pdb-3j69)

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color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.115
0.088
0.076
0.066
0.062
0.058
0.051
0.037
0.018
0.014







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j69"(PDB-format) or 
 "3j69"(mmCIF-format), and read it.

  2.  Download the Target map "emd_5372.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.699181,-0.417961,-0.580047 113.778692 center 0,0,0 model #1
move 89.371299,-43.487472,93.253088 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!