Pairwise fitting emdb-5372 on pdb-3j22 by gmfit










Pairwise fitting of target emdb-5372 on reference pdb-3j22 by gmfit(PID:3140888).





RANK[1] Corr.Coeff:0.098

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5372)

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Structural transitions in RCNMV revealing potential mechanism of RNA release (EGTA map) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5372)]







REFERENCE(pdb-3j22)

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b'THE ENTEROVIRUS 71 A-PARTICLE                                         ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.098
0.058
0.025
0.021
0.020
0.015
0.012
0.009
0.004
0.003







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j22"(PDB-format) or 
 "3j22"(mmCIF-format), and read it.

  2.  Download the Target map "emd_5372.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.084920,0.888269,0.451405 178.036740 center 0,0,0 model #1
move -58.639145,-82.547957,130.275350 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!