Pairwise fitting emdb-5372 on emdb-3246 by gmfit










Pairwise fitting of target emdb-5372 on reference emdb-3246 by gmfit(PID:2109217).





RANK[1] Corr.Coeff:0.751

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5372)

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Structural transitions in RCNMV revealing potential mechanism of RNA release (EGTA map) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5372)]







REFERENCE(emdb-3246)

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Electron cryo-microscopy of Grapevine Fanleaf Virus complex with Nanobody [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.751
0.742
0.739
0.738
0.733
0.730
0.729
0.728
0.726
0.726







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3246.map.gz", and read it.

  2.  Download the Target map "emd_5372.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.698863,-0.155212,0.698212 106.055389 center 0,0,0 model #1
move -0.029682,-0.105217,-2.118090 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!