Pairwise fitting emdb-5372 on emdb-1133 by gmfit










Pairwise fitting of target emdb-5372 on reference emdb-1133 by gmfit(PID:2423024).





RANK[1] Corr.Coeff:0.629

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5372)

display:



color:



Structural transitions in RCNMV revealing potential mechanism of RNA release (EGTA map) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5372)]







REFERENCE(emdb-1133)

display:



color:


The structure of the poliovirus 135S cell entry intermediate at 10-angstrom resolution reveals the location of an externalized polypeptide that binds to membranes. [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.629
0.626
0.621
0.620
0.617
0.615
0.615
0.615
0.614
0.613







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1133.map.gz", and read it.

  2.  Download the Target map "emd_5372.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.557851,-0.582226,0.591452 157.418239 center 0,0,0 model #1
move 0.915609,0.185426,-1.010780 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!