Pairwise fitting emdb-5372 on emdb-1049 by gmfit










Pairwise fitting of target emdb-5372 on reference emdb-1049 by gmfit(PID:2458621).





RANK[1] Corr.Coeff:0.736

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5372)

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Structural transitions in RCNMV revealing potential mechanism of RNA release (EGTA map) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5372)]







REFERENCE(emdb-1049)

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A cellular receptor of human rhinovirus type 2, the very-low-density lipoprotein receptor, binds to two neighboring proteins of the viral capsid. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.736
0.732
0.728
0.728
0.728
0.726
0.724
0.724
0.723
0.722







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1049.map.gz", and read it.

  2.  Download the Target map "emd_5372.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.326047,-0.502695,0.800619 171.333630 center 0,0,0 model #1
move -0.223077,-1.486134,-1.135226 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!