Pairwise fitting emdb-5168 on pdb-5mw1 by gmfit










Pairwise fitting of target emdb-5168 on reference pdb-5mw1 by gmfit(PID:2107018).





RANK[1] Corr.Coeff:0.724

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5168)

display:



color:



Direct visualization of secondary structures of F-actin by electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5168)]







REFERENCE(pdb-5mw1)

display:



color:


b'CRYOEM STRUCTURE OF CRENACTIN DOUBLE HELICAL FILAMENT AT 3.8A         ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.724
0.713
0.708
0.589
0.578
0.573
0.536
0.519
0.315
0.282







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5mw1"(PDB-format) or 
 "5mw1"(mmCIF-format), and read it.

  2.  Download the Target map "emd_5168.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.000708,0.008285,-0.999965 171.434791 center 0,0,0 model #1
move 189.179856,188.107938,202.683450 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!