Pairwise fitting emdb-5168 on pdb-5fik by gmfit










Pairwise fitting of target emdb-5168 on reference pdb-5fik by gmfit(PID:3783191).





RANK[1] Corr.Coeff:0.484

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5168)

display:



color:



Direct visualization of secondary structures of F-actin by electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5168)]







REFERENCE(pdb-5fik)

display:



color:


b'BOVINE MITOCHONDRIAL ATP SYNTHASE STATE 3A                            ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.484
0.472
0.471
0.470
0.465
0.449
0.445
0.408
0.325
0.287







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5fik"(PDB-format) or 
 "5fik"(mmCIF-format), and read it.

  2.  Download the Target map "emd_5168.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.350453,0.933922,-0.070519 178.703517 center 0,0,0 model #1
move 206.349267,214.535552,222.610507 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!