Pairwise fitting emdb-5168 on pdb-5are by gmfit










Pairwise fitting of target emdb-5168 on reference pdb-5are by gmfit(PID:4155977).





RANK[1] Corr.Coeff:0.482

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5168)

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color:



Direct visualization of secondary structures of F-actin by electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5168)]







REFERENCE(pdb-5are)

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color:


b'BOVINE MITOCHONDRIAL ATP SYNTHASE STATE 1B                            ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.482
0.468
0.463
0.450
0.441
0.423
0.418
0.398
0.305
0.302







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5are"(PDB-format) or 
 "5are"(mmCIF-format), and read it.

  2.  Download the Target map "emd_5168.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.102189,0.101639,-0.989559 40.324738 center 0,0,0 model #1
move 207.157871,218.602471,228.171018 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!