Pairwise fitting emdb-5168 on pdb-3j7t by gmfit










Pairwise fitting of target emdb-5168 on reference pdb-3j7t by gmfit(PID:1265923).





RANK[1] Corr.Coeff:0.468

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5168)

display:



color:



Direct visualization of secondary structures of F-actin by electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5168)]







REFERENCE(pdb-3j7t)

display:



color:


b'CALCIUM ATPASE STRUCTURE WITH TWO BOUND CALCIUM IONS DETERMINED BY    ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.468
0.450
0.416
0.401
0.396
0.395
0.383
0.366
0.310
0.295







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j7t"(PDB-format) or 
 "3j7t"(mmCIF-format), and read it.

  2.  Download the Target map "emd_5168.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.602269,-0.738564,0.302977 162.262352 center 0,0,0 model #1
move -29.734484,-7.155186,29.957192 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!