Pairwise fitting emdb-5168 on pdb-3j0b by gmfit










Pairwise fitting of target emdb-5168 on reference pdb-3j0b by gmfit(PID:4000243).





RANK[1] Corr.Coeff:0.482

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5168)

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color:



Direct visualization of secondary structures of F-actin by electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5168)]







REFERENCE(pdb-3j0b)

display:



color:


b'CRYO-EM RECONSTRUCTION OF WEST NILE VIRUS                             ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.482
0.433
0.430
0.410
0.407
0.383
0.344
0.337
0.264
0.254







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j0b"(PDB-format) or 
 "3j0b"(mmCIF-format), and read it.

  2.  Download the Target map "emd_5168.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.517898,-0.373280,0.769703 144.533904 center 0,0,0 model #1
move 20.384682,-28.541267,210.893950 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!