Pairwise fitting emdb-5168 on pdb-1ucu by gmfit










Pairwise fitting of target emdb-5168 on reference pdb-1ucu by gmfit(PID:2179694).





RANK[1] Corr.Coeff:0.351

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5168)

display:



color:



Direct visualization of secondary structures of F-actin by electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5168)]







REFERENCE(pdb-1ucu)

display:



color:


b'R-TYPE STRAIGHT FLAGELLAR FILAMENT MADE OF FULL-LENGTH FLAGELLIN      ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.351
0.298
0.286
0.271
0.270
0.258
0.258
0.254
0.173
0.159







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "1ucu"(PDB-format) or 
 "1ucu"(mmCIF-format), and read it.

  2.  Download the Target map "emd_5168.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.289239,-0.127910,-0.948673 98.539749 center 0,0,0 model #1
move 48.836712,-27.831016,0.291396 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!