Pairwise fitting emdb-5168 on pdb-1nn8 by gmfit










Pairwise fitting of target emdb-5168 on reference pdb-1nn8 by gmfit(PID:3705766).





RANK[1] Corr.Coeff:0.415

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5168)

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color:



Direct visualization of secondary structures of F-actin by electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5168)]







REFERENCE(pdb-1nn8)

display:



color:


b'CRYOEM STRUCTURE OF POLIOVIRUS RECEPTOR BOUND TO POLIOVIRUS           ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.415
0.387
0.376
0.361
0.347
0.342
0.338
0.327
0.221
0.200







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "1nn8"(PDB-format) or 
 "1nn8"(mmCIF-format), and read it.

  2.  Download the Target map "emd_5168.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.301478,0.494355,0.815306 155.393723 center 0,0,0 model #1
move -129.828075,73.530323,52.247555 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!