Pairwise fitting emdb-5168 on pdb-1dgi by gmfit










Pairwise fitting of target emdb-5168 on reference pdb-1dgi by gmfit(PID:3986666).





RANK[1] Corr.Coeff:0.461

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5168)

display:



color:



Direct visualization of secondary structures of F-actin by electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5168)]







REFERENCE(pdb-1dgi)

display:



color:


b'CRYO-EM STRUCTURE OF HUMAN POLIOVIRUS(SEROTYPE 1)COMPLEXED WITH THREE ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.461
0.425
0.394
0.376
0.365
0.360
0.351
0.350
0.339
0.313







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "1dgi"(PDB-format) or 
 "1dgi"(mmCIF-format), and read it.

  2.  Download the Target map "emd_5168.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.817820,0.530660,0.222643 73.097347 center 0,0,0 model #1
move 42.412095,55.424211,124.945339 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!