Pairwise fitting emdb-5168 on emdb-5559 by gmfit



Pairwise fitting of target emdb-5168 on reference emdb-5559 by gmfit(PID:2452111).

RANK[1] Corr.Coeff:0.591 [JSmol] [Molmil]
TARGET(emdb-5168)
display:
color:
Direct visualization of secondary structures of F-actin by electron cryomicroscopy [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-5168)]
REFERENCE(emdb-5559)
display:
color:
Cryo-em map of one molecule of factor VIII light chain from helically organized factor VIII light chain molecules bound to lipid nanotubes [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.591 0.546 0.535 0.500 0.468 0.460 0.448 0.432 0.305 0.298

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_5559.map.gz", and read it.
  2. Download the Target map "emd_5168.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.544674,-0.422192,-0.724626 155.428767 center 0,0,0 model #1
    move -12.773360,-59.018123,-21.752256 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!