Pairwise fitting emdb-5168 on emdb-1104 by gmfit










Pairwise fitting of target emdb-5168 on reference emdb-1104 by gmfit(PID:257496).





RANK[1] Corr.Coeff:0.603

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5168)

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color:



Direct visualization of secondary structures of F-actin by electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5168)]







REFERENCE(emdb-1104)

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color:


Global conformational rearrangements during the activation of the GDP/GTP exchange factor Vav3. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.603
0.590
0.575
0.566
0.555
0.549
0.496
0.489
0.384
0.347







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1104.map.gz", and read it.

  2.  Download the Target map "emd_5168.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.952771,-0.130612,0.274169 172.422326 center 0,0,0 model #1
move 13.905692,8.053725,5.088518 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!