Pairwise fitting emdb-5111 on emdb-1459 by gmfit










Pairwise fitting of target emdb-5111 on reference emdb-1459 by gmfit(PID:4121427).





RANK[1] Corr.Coeff:0.633

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5111)

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Feline panleukopenia virus in complex with FAb from neutralizing antibody MAb E [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5111)]







REFERENCE(emdb-1459)

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Partitivirus structure reveals a 120-subunit, helix-rich capsid with distinctive surface arches formed by quasisymmetric coat-protein dimers. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.633
0.631
0.625
0.624
0.622
0.622
0.622
0.622
0.621
0.618







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1459.map.gz", and read it.

  2.  Download the Target map "emd_5111.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.300664,-0.651284,0.696728 150.325565 center 0,0,0 model #1
move -0.982250,-3.054992,2.710992 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!