Pairwise fitting emdb-5034 on emdb-8448 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-8448 by gmfit(PID:37736).





RANK[1] Corr.Coeff:0.512

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

display:



color:



Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-8448)

display:



color:


Structure of bL17-depleted large ribosomal subunit assembly intermediate - Class D3 [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.512
0.506
0.496
0.484
0.428
0.419
0.413
0.404
0.316
0.302







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_8448.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.243147,0.298952,0.922771 47.179171 center 0,0,0 model #1
move 165.857496,-28.853341,5.281033 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!