Pairwise fitting emdb-5034 on emdb-6385 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-6385 by gmfit(PID:3581793).





RANK[1] Corr.Coeff:0.384

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

display:



color:



Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-6385)

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color:


Electron cryo-microscopy of AP-1:Arf1:Nef complex [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.384
0.378
0.364
0.360
0.356
0.332
0.325
0.298
0.284
0.284







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6385.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.971518,0.094049,-0.217501 173.196126 center 0,0,0 model #1
move 43.770335,330.978177,379.593911 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!