Pairwise fitting emdb-5034 on emdb-5842 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-5842 by gmfit(PID:3956037).





RANK[1] Corr.Coeff:0.438

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

display:



color:



Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-5842)

display:



color:


EttA-bound E. coli 70S ribosome complex containing P-site tRNA (raw map) [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.438
0.438
0.430
0.428
0.413
0.413
0.396
0.393
0.371
0.371







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5842.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.317772,0.286258,0.903923 16.274114 center 0,0,0 model #1
move 41.159414,-26.989426,7.743045 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!