Pairwise fitting emdb-5034 on emdb-4028 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-4028 by gmfit(PID:4116079).





RANK[1] Corr.Coeff:0.396

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

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Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-4028)

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Human Anaphase-Promoting Complex/Cyclosome (APC/C) APC15 deletion mutant bound to Mitotic Checkpoint Complex (MCC) and the E2 UBE2C (aka UBCH10) poised for ubiquitination of MCC's CDC20 [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.396
0.395
0.390
0.388
0.386
0.384
0.376
0.366
0.359
0.358







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_4028.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.724491,0.509446,-0.464304 111.507807 center 0,0,0 model #1
move -31.834062,288.077329,377.261946 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 4028)]

[Download the target GMM(emdb 5034)]

[Download gmfit result file(4116079)]