Pairwise fitting emdb-5034 on emdb-4028 by gmfit



Pairwise fitting of target emdb-5034 on reference emdb-4028 by gmfit(PID:4095263).

RANK[1] Corr.Coeff:0.396 [JSmol] [Molmil]
TARGET(emdb-5034)
display:
color:
Structure of a type IV secretion system core complex [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-5034)]
REFERENCE(emdb-4028)
display:
color:
Human Anaphase-Promoting Complex/Cyclosome (APC/C) APC15 deletion mutant bound to Mitotic Checkpoint Complex (MCC) and the E2 UBE2C (aka UBCH10) poised for ubiquitination of MCC's CDC20 [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.396 0.395 0.390 0.388 0.386 0.384 0.376 0.366 0.359 0.358

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_4028.map.gz", and read it.
  2. Download the Target map "emd_5034.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.724491,0.509446,-0.464304 111.507807 center 0,0,0 model #1
    move -31.834062,288.077329,377.261946 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 4028)] [Download the target GMM(emdb 5034)] [Download gmfit result file(4095263)]