Pairwise fitting emdb-5034 on emdb-4025 by gmfit



Pairwise fitting of target emdb-5034 on reference emdb-4025 by gmfit(PID:1505978).

RANK[1] Corr.Coeff:0.414 [JSmol] [Molmil]
TARGET(emdb-5034)
display:
color:
Structure of a type IV secretion system core complex [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-5034)]
REFERENCE(emdb-4025)
display:
color:
Human Anaphase-promoting complex/Cyclosome (APC/C) APC15 deletion mutant bound to the E2 UBE2C (aka UBCH10) poised for ubiquitin ligation to substrate. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.414 0.393 0.392 0.389 0.386 0.382 0.382 0.377 0.371 0.357

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_4025.map.gz", and read it.
  2. Download the Target map "emd_5034.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.200060,0.979781,-0.002327 103.222784 center 0,0,0 model #1
    move 107.603202,45.382731,446.546614 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!