Pairwise fitting emdb-5034 on emdb-2681 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-2681 by gmfit(PID:3815057).





RANK[1] Corr.Coeff:0.469

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

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Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-2681)

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color:


Assembly principles of the unique cage formed by the AAA+ ATPase RavA hexamer and the lysine decarboxylase LdcI decamer [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.469
0.467
0.466
0.466
0.466
0.465
0.465
0.458
0.244
0.244







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2681.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.800000,-0.600000,0.000000 180.000000 center 0,0,0 model #1
move 122.585395,219.249310,165.289583 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!