Pairwise fitting emdb-5034 on emdb-2175 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-2175 by gmfit(PID:3526571).





RANK[1] Corr.Coeff:0.390

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

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color:



Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-2175)

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color:


Negative stain electron microscopy of a CSN(dCsn5)-SCF~Nedd8/Skp2/Cks1 complex [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.390
0.346
0.340
0.329
0.327
0.310
0.300
0.284
0.192
0.184







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2175.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.999014,0.041998,-0.014388 86.624042 center 0,0,0 model #1
move 24.330574,25.838567,379.299954 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!