Pairwise fitting emdb-5034 on emdb-1820 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-1820 by gmfit(PID:2194440).





RANK[1] Corr.Coeff:0.433

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

display:



color:



Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-1820)

display:



color:


Yeast anaphase promoting complex (monomer) [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.433
0.408
0.407
0.382
0.380
0.375
0.372
0.343
0.290
0.284







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1820.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.829380,0.512393,-0.222668 81.423807 center 0,0,0 model #1
move -42.389890,83.536794,363.114040 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!