Pairwise fitting emdb-5034 on emdb-1816 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-1816 by gmfit(PID:2082271).





RANK[1] Corr.Coeff:0.416

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

display:



color:



Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-1816)

display:



color:


Structure of S. cerevisiae anaphase promoting complex [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.416
0.399
0.388
0.384
0.347
0.345
0.332
0.330
0.292
0.287







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1816.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.461451,0.486865,-0.741637 108.076678 center 0,0,0 model #1
move -182.251266,228.307842,98.960593 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!